skip to main content


Search for: All records

Creators/Authors contains: "Wang, Qi"

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Free, publicly-accessible full text available September 30, 2024
  2. Free, publicly-accessible full text available September 29, 2024
  3. We experimentally investigate spatiotemporal lasing dynamics in semiconductor microcavities with various geometries, featuring integrable or chaotic ray dynamics. The classical ray dynamics directly impacts the lasing dynamics, which is primarily determined by the local directionality of long-lived ray trajectories. The directionality of optical propagation dictates the characteristic length scales of intensity variations, which play a pivotal role in nonlinear light-matter interactions. While wavelength-scale intensity variations tend to stabilize lasing dynamics, modulation on much longer scales causes spatial filamentation and irregular pulsation. Our results will pave the way to control the lasing dynamics by engineering the cavity geometry and ray dynamical properties. 
    more » « less
    Free, publicly-accessible full text available October 1, 2024
  4. Here, we use magnetically driven self-assembled achiral swimmers made of two to four superparamagnetic micro-particles to provide insight into how swimming kinematics develop in complex, shear-thinning fluids. Two model shear-thinning polymer fluids are explored, where measurements of swimming dynamics reveal contrasting propulsion kinematics in shear-thinning fluids vs a Newtonian fluid. When comparing the velocity of achiral swimmers in polymer fluids to their dynamics in water, we observe kinematics dependent on (1) no shear-thinning, (2) shear-thinning with negligible elasticity, and (3) shear-thinning with elasticity. At the step-out frequency, the fluidic environment's viscoelastic properties allow swimmers to propel faster than their Newtonian swimming speed, although their swimming gait remains similar. Micro-particle image velocimetry is also implemented to provide insight into how shear-thinning viscosity fluids with elasticity can modify the flow fields of the self-assembled magnetic swimmers. Our findings reveal that flow asymmetry can be created for symmetric swimmers through either the confinement effect or the Weissenberg effect. For pseudo-chiral swimmers in shear-thinning fluids, only three bead swimmers show swimming enhancement, while four bead swimmers always have a decreased step-out frequency velocity compared to their dynamics in water.

     
    more » « less
    Free, publicly-accessible full text available September 1, 2024
  5. Free, publicly-accessible full text available August 1, 2024
  6. Abstract Motivation

    Interactions among microbes within microbial communities have been shown to play crucial roles in human health. In spite of recent progress, low-level knowledge of bacteria driving microbial interactions within microbiomes remains unknown, limiting our ability to fully decipher and control microbial communities.

    Results

    We present a novel approach for identifying species driving interactions within microbiomes. Bakdrive infers ecological networks of given metagenomic sequencing samples and identifies minimum sets of driver species (MDS) using control theory. Bakdrive has three key innovations in this space: (i) it leverages inherent information from metagenomic sequencing samples to identify driver species, (ii) it explicitly takes host-specific variation into consideration, and (iii) it does not require a known ecological network. In extensive simulated data, we demonstrate identifying driver species identified from healthy donor samples and introducing them to the disease samples, we can restore the gut microbiome in recurrent Clostridioides difficile (rCDI) infection patients to a healthy state. We also applied Bakdrive to two real datasets, rCDI and Crohn's disease patients, uncovering driver species consistent with previous work. Bakdrive represents a novel approach for capturing microbial interactions.

    Availability and implementation

    Bakdrive is open-source and available at: https://gitlab.com/treangenlab/bakdrive.

     
    more » « less
  7. Using EEG and local field potentials (LFPs) as an index of large-scale neural activities, research has been able to associate neural oscillations in different frequency bands with markers of cognitive functions, goal-directed behavior, and various neurological disorders. While this gives us a glimpse into how neurons communicate throughout the brain, the causality of these synchronized network activities remains poorly understood. Moreover, the effect of the major neuromodulatory systems (e.g., noradrenergic, cholinergic, and dopaminergic) on brain oscillations has drawn much attention. More recent studies have suggested that cross-frequency coupling (CFC) is heavily responsible for mediating network-wide communication across subcortical and cortical brain structures, implicating the importance of neurotransmitters in shaping coordinated actions. By bringing to light the role each neuromodulatory system plays in regulating brain-wide neural oscillations, we hope to paint a clearer picture of the pivotal role neural oscillations play in a variety of cognitive functions and neurological disorders, and how neuromodulation techniques can be optimized as a means of controlling neural network dynamics. The aim of this review is to showcase the important role that neuromodulatory systems play in large-scale neural network dynamics, informing future studies to pay close attention to their involvement in specific features of neural oscillations and associated behaviors. 
    more » « less
  8. Colloidal Ag particles decorated with Fe 3 O 4 islands can be electrochemically or photochemically activated as inverse catalysts for C(sp 2 )–H heteroarylation. The silver–iron oxide (SIO) particles are reduced into redox-active forms by cathodic charging at mild potentials or by short-term light exposure, and can be reused multiple times by magnetic cycling without further activation. A negative shift in the reduction peak is attributed to an overpotential produced by surface Fe 3 O 4 which separates residual Ag ions or clusters from bulk silver. The catalytic efficiency of SIO is maintained even with acid degradation, which can be countered simply by adding water to the reaction medium. 
    more » « less
  9. Free, publicly-accessible full text available June 1, 2024